Segmentation COVID-19 Lung Infections with the R-CNN Mask Network
DOI:
https://doi.org/10.59681/2175-4411.v15.iEspecial.2023.1100Keywords:
Image Processing, Computer-Assisted, COVID-19, CT scansAbstract
COVID-19 has spread around the world causing depletion of medical resources in several countries. Computational methods that analyze images of pulmonary infections can be used for diagnosis and estimation of the evolution of this disease. The paper presents the results of a deep learning model (Mask R-CNN), for automatic segmentation of lung infections in CT scans, using the COVID-19 CT Lung and Infection Segmentation Dataset. The best results of this paper, with the network that performs the segmentation of lungs, were 69.92% for the Dice index and 55.72% for the Jaccard index.
References
Jun M, Cheng G, Yixin W, Xingle A, Jiantao G, Ziqi Y, Minqing Z, Xin L, Xueyuan D, Shucheng C, Hao W. COVID-19 CT lung and infection segmentation dataset.
He K, Gkioxari G, Dollár P, Girshick R. Mask r-cnn. IEEE international conference on computer vision 2017 (pp. 2961-2969).
Sawatzky J, Souri Y, Grund C, Gall J. What object should i use?-task driven object detection. IEEE/CVF Conference on Computer Vision and Pattern Recognition 2019 (pp. 7605-7614).
Oulefki A, Agaian S, Trongtirakul T, Laouar AK. Automatic COVID-19 lung infected region segmentation and measurement using CT-scans images. Pattern recognition. 2021 Jun 1;114:107747.
Amyar A, Modzelewski R, Li H, Ruan S. Multi-task deep learning based CT imaging analysis for COVID-19 pneumonia: Classification and segmentation. Computers in Biology and Medicine. 2020 Nov 1;126:104037.
Wang G, Liu X, Li C, Xu Z, Ruan J, Zhu H, Meng T, Li K, Huang N, Zhang S. A noise-robust framework for automatic segmentation of COVID-19 pneumonia lesions from CT images. IEEE Transactions on Medical Imaging. 2020 Jun 5;39(8):2653-63.
Zhou T, Canu S, Ruan S. An automatic covid-19 ct segmentation network using spatial and channel attention mechanism. arXiv 2020. arXiv preprint arXiv:2004.06673.
El-Bana S, Al-Kabbany A, Sharkas M. A multi-task pipeline with specialized streams for classification and segmentation of infection manifestations in COVID-19 scans. PeerJ Computer Science. 2020 Oct 19;6:e303.
Zhang P, Zhong Y, Deng Y, Tang X, Li X. CoSinGAN: learning COVID-19 infection segmentation from a single radiological image. Diagnostics. 2020 Nov 3;10(11):901.
Fan DP, Zhou T, Ji GP, Zhou Y, Chen G, Fu H, Shen J, Shao L. Inf-net: Automatic covid-19 lung infection segmentation from ct images. IEEE Transactions on Medical Imaging. 2020 May 22;39(8):2626-37.
Elharrouss O, Subramanian N, Al-Maadeed S. An encoder-decoder-based method for COVID-19 lung infection segmentation. arXiv preprint arXiv:2007.00861. 2020 Jul 2.
Yao Q, Xiao L, Liu P, Zhou SK.
Label-free segmentation of COVID-19 lesions in lung CT. IEEE transactions on medical imaging. 2021 Mar 24;40(10):2808-19.
Müller D, Rey IS, Kramer F. Automated chest ct image segmentation of covid-19 lung infection based on 3d u-net. arXiv preprint arXiv:2007.04774. 2020 Jun 24.
Downloads
Published
How to Cite
Issue
Section
License
Copyright (c) 2023 Hugo Silveira Sousa, Abdenago Alves Pereira Neto, Iális Cavalcante de Paula Júnior, Clara Ricardo de Melo
This work is licensed under a Creative Commons Attribution-NonCommercial-ShareAlike 4.0 International License.
Submission of a paper to Journal of Health Informatics is understood to imply that it is not being considered for publication elsewhere and that the author(s) permission to publish his/her (their) article(s) in this Journal implies the exclusive authorization of the publishers to deal with all issues concerning the copyright therein. Upon the submission of an article, authors will be asked to sign a Copyright Notice. Acceptance of the agreement will ensure the widest possible dissemination of information. An e-mail will be sent to the corresponding author confirming receipt of the manuscript and acceptance of the agreement.